Chapter 2: Gastrointestinal Infections

The Burden of Digestive Diseases in the United States

James E. Everhart, M.D., M.P.H.

Most GI infections are self-limited and do not come to medical attention, although they are both extremely common and disruptive of daily activities, including school and work. GI infections are caused by viral and bacterial pathogens, but the minority that are most severe and for which causative agents are found are typically bacterial. The ICD-9 and ICD-10 codes match well, except for nonspecified organisms. The most significant differences are that Intestinal Infections Due to Other Organisms (008) and Ill-Defined Intestinal Infections (009) in ICD-9 were replaced by Other Bacterial Intestinal Infections (A04), Other Bacterial Foodborne Intoxications (A05), and Viral and Other Specified Intestinal Infections (A08) in ICD-10. Here is a breakdown of the codes for GI infections:

  ICD-9 ICD-10
Cholera 001 A00
Typhoid and Paratyphoid 002 A01
Other Salmonella 003 A02
Shigellosis 004 A03
Other Food Poisoning 005
Other Bacterial Intestinal Infections A04
Other Bacterial Foodborne Intoxications A05
Amebiasis 006 A06
Other Protozoal Intestinal Diseases 007 A07
Intestinal Infections Due to Other Organisms 008
Viral and Other Specified Intestinal Infections A08
Ill-Defined Intestinal Infections 009
Diarrhea and Gastroenteritis of Presumed Infectious Origin A09
All GI Infections 001–009 A00–A09

As shown in Table 1, in 2004, more than half of ambulatory care visits for GI infections occurred in those under the age of 15 years. When first-listed, the rate in this age group (1,930 per 100,000 population), was at least 4 times that of any other age group. Age-adjusted rates were 45.7 percent higher among whites than blacks and 18.1 percent higher among females than males. Relative to the frequency of ambulatory care visits, hospitalizations were uncommon. In contrast to those in ambulatory care, persons over age 65 years had both the highest number and rate of hospitalizations, and blacks had rates similar to those of whites. GI infections were considerably more often a secondary diagnosis (272,000) than first-listed diagnosis (178,000). The rate of age-adjusted hospitalizations with a diagnosis of GI infections increased by 92.8 percent between 1979 (76.1 per 100,000) and 2004 (146.7 per 100,000) and by 43.3 percent between 1992 (102.4 per 100,000) and 2004 (Figure 1).

In 2004, there were 4,396 deaths with a GI infection listed as the underlying cause (Table 2). The large majority of these deaths occurred among persons age 65 years and older. The death rate among whites was 50 percent higher than that among blacks, and the rates were similar among females and males. Similar patterns were seen for GI infections as either underlying or contributing cause. Because the majority of deaths occurred in the elderly, the YPLL prior to age 75 years was small, less than 3 years per death. In recent years, there has been a remarkable increase in deaths from GI infections (Figure 2). Over the 20-year period between 1979 and 1999, the age-adjusted underlying cause mortality rate doubled from 0.21 per 100,000 to 0.42 per 100,000. But in the 5 years from 1999 to 2004, the rate more than tripled to 1.44 per 100,000. About two-thirds of the more recent increase is due to one bacterial cause, Clostridium difficile, which is coded under Other Bacterial Intestinal Infections as A04.7.

MEDICATIONS

The costliest prescriptions filled at retail pharmacies for GI infections in 2004, according to the Verispan database (Appendix 2), are shown in Table 3. Most were antimicrobial agents, such as ciprofloxacin, or they affected GI motility, such as promethazine. An estimated 938,000 outpatient prescriptions were filled.

Table 1. Gastrointestinal Infections: Number and Age-Adjusted Rates of Ambulatory Care Visits and Hospital Discharges With First-Listed and All-Listed Diagnoses by Age, Race, and Sex in the United States, 2004

Source: National Ambulatory Medical Care Survey (NAMCS) and National Hospital Ambulatory Medical Care Survey (NHAMCS) (3-year average, 2003–2005), and Healthcare Cost and Utilization Project Nationwide Inpatient Sample (HCUP NIS)

Demographic Characteristics Ambulatory Care Visits First-Listed Diagnosis Number in Thousands Ambulatory Care Visits First-Listed Diagnosis Rate per 100,000 Ambulatory Care Visits All-Listed Diagnosis Number in Thousands Ambulatory Care Visits All-Listed Diagnosis Rate per 100,000 Hospital Discharges First-Listed Diagnosis Number in Thousands Hospital Discharges First-Listed Diagnosis Rate per 100,000 Hospital Discharges All-Listed Diagnosis Number in Thousands Hospital Discharges All-Listed Diagnosis Rate per 100,000
AGE (Years)
Under 15
1,174 1,930 1,222 2,010 47 77 83 137
AGE (Years)
15–44
579 460 672 534 31 25 65 51
AGE (Years)
45–64
266 377 311 440 34 47 86 122
AGE (Years)
65+
109 301 159 439 66 183 215 593
Race
White
1,800 785 1,994 867 140 57 359 144
Race
Black
225 529 253 595 16 46 48 151
Sex
Female
1,142 796 1,279 888 107 67 261 160
Sex
Male
986 684 1,085 752 71 52 188 142
Total 2,128 725 2,365 805 178 61 450 153

Figure 1. Gastrointestinal Infections: Age-Adjusted Rates of Ambulatory Care Visits and Hospital Discharges With All–Listed Diagnoses in the United States, 1979–2004

The rate of ambulatory care visits over time (age-adjusted to the 2000 U.S. population) is shown by 3-year periods (except for the first period which is 2 years), between 1992 and 2005 (beginning with 1992–1993 and ending with 2003–2005). Ambulatory care visits per 100,000 increased from 676 in 1992-1993 to 817 in 2003-2005. Hospitalizations per 100,000 increased from 76.1 in 1979 to 101 in 2000, and then more sharply to 147 in 2004.
Source: National Ambulatory Medical Care Survey (NAMCS) and National Hospital Ambulatory Medical Care Survey (NHAMCS) (averages 1992–1993, 1994–1996, 1997–1999, 2000–2002, 2003–2005), and National Hospital Discharge Survey (NHDS)

Table 2. Gastrointestinal Infections: Number and Age-Adjusted Rates of Deaths and Years of Potential Life Lost (to Age 75) by Age, Race, and Sex in the United States, 2004

Source: Vital Statistics of the United States

Demographic Characteristics Underlying Cause Number of Deaths Underlying Cause Rate per 100,000 Underlying Cause Years of Potential Life Lost in Thousands Underlying or Other Cause Number of Deaths Underlying or Other Cause Rate per 100,000
AGE (Years)
Under 15
32 0.1 2.3 40 0.1
AGE (Years)
15–44
49 0.0 1.9 97 0.1
AGE (Years)
45–64
353 0.5 6.0 577 0.8
AGE (Years)
65+
3,962 10.9 2.6 6,345 17.5
Race
White
4,104 1.5 10.7 6,552 2.5
Race
Black
241 1.0 1.6 422 1.6
Sex
Female
2,746 1.5 6.4 4,257 2.3
Sex
Male
1,650 1.4 6.4 2,802 2.4
Total 4,396 1.5 12.8 7,059 2.4

Figure 2. Gastrointestinal Infections: Age-Adjusted Rates of Death in the United States, 1979–2004

In recent years, there has been an exponential increase in deaths. Over the 20-year period between 1979 and 1999, underlying-cause mortality per 100,000 doubled from 0.21 to 0.42. But in the 5 years from 1999 to 2004, the rate more than tripled to 1.44 per 100,000. The trend in all-cause mortality per 100,000 was similar, increasing from 0.36 in 1979 to 0.82 in 1999 to 2.32 in 2004.
Source: Vital Statistics of the United States

Table 3. Gastrointestinal Infections: Costliest Prescriptions

Source: Verispan

DRUG Prescription (#) Prescription Retail Cost Cost
Vancomycin 14,507 1.5% $28,375,011 62.9%
Promethazine 346,794 37.0 5,985,173 13.3
Ciprofloxacin 126,523 13.4 5,132,893 11.4
Metronidazole 184,090 19.6 2,986,288 6.6
Loperamide 112,285 12.0 865,924 1.9
Diphenoxylate 122,042 13.0 832,096 1.8
Levofloxacin 7,325 0.8 483,046 1.1
Acidophilus/Bulgaricus 20,432 2.2 275,062 0.6
Ciprofloxacin-Betaine Combination 1,215 0.1 109,988 0.2
Prochlorperazine 2,927 0.3 26,326 0.1
Other 67 0.0 5,788 0.0
Total 938,207 100.0% $45,077,595 100.0%
Last Reviewed January 2008